Needle
An application for fast and efficient searches of NGS data.
Public Attributes | List of all members
estimate_arguments Struct Reference

The arguments necessary for a search. More...

#include </build/reproducible-path/seqan-needle-1.0.1.0.1.git.439eeab+ds/include/estimate.h>

Public Attributes

std::filesystem::path search_file
 
std::filesystem::path path_in {"./"}
 
bool normalization_method {0}
 

Detailed Description

The arguments necessary for a search.

Parameters
std::filesystem::pathsearch_file The sequence file containing the transcripts to be searched for.
std::filesystem::pathpath_in The path to the directory where the IBFs can be found. Default: Current directory.
boolnormalization_method Flag, true if normalization should be used.

Member Data Documentation

◆ normalization_method

bool estimate_arguments::normalization_method {0}

◆ path_in

std::filesystem::path estimate_arguments::path_in {"./"}

◆ search_file

std::filesystem::path estimate_arguments::search_file

The documentation for this struct was generated from the following file: