SeqAn3 3.2.0
The Modern C++ library for sequence analysis.

alignment → std Relation

File in seqan3/alignmentIncludes file in seqan3/std
aligned_sequence / aligned_sequence_concept.hppranges
configuration / align_config_scoring_scheme.hppconcepts
decorator / gap_decorator.hppranges
matrix / detail / advanceable_alignment_coordinate.hppconcepts
matrix / detail / affine_cell_proxy.hppconcepts
matrix / detail / aligned_sequence_builder.hppconcepts
matrix / detail / aligned_sequence_builder.hppranges
matrix / detail / alignment_matrix_column_major_range_base.hppranges
matrix / detail / alignment_matrix_column_major_range_base.hppspan
matrix / detail / alignment_optimum.hppconcepts
matrix / detail / alignment_score_matrix_one_column.hppranges
matrix / detail / alignment_score_matrix_one_column.hppspan
matrix / detail / alignment_score_matrix_one_column_banded.hppranges
matrix / detail / alignment_score_matrix_one_column_banded.hppspan
matrix / detail / alignment_trace_matrix_full.hppranges
matrix / detail / alignment_trace_matrix_full_banded.hppranges
matrix / detail / alignment_trace_matrix_proxy.hppconcepts
matrix / detail / combined_score_and_trace_matrix.hppranges
matrix / detail / coordinate_matrix.hppconcepts
matrix / detail / coordinate_matrix.hppranges
matrix / detail / matrix_concept.hppconcepts
matrix / detail / matrix_coordinate.hppconcepts
matrix / detail / score_matrix_single_column.hppranges
matrix / detail / trace_iterator_base.hppconcepts
matrix / detail / trace_iterator_base.hppranges
matrix / detail / trace_matrix_full.hppranges
matrix / detail / trace_matrix_full.hppspan
matrix / detail / two_dimensional_matrix.hppranges
matrix / detail / two_dimensional_matrix_iterator_base.hppconcepts
matrix / detail / two_dimensional_matrix_iterator_base.hppranges
matrix / detail / two_dimensional_matrix_iterator_concept.hppconcepts
pairwise / detail / alignment/pairwise/detail/concept.hppranges
pairwise / detail / pairwise_alignment_algorithm.hppconcepts
pairwise / detail / pairwise_alignment_algorithm.hppranges
pairwise / detail / pairwise_alignment_algorithm_banded.hppconcepts
pairwise / detail / pairwise_alignment_algorithm_banded.hppranges
pairwise / detail / policy_optimum_tracker_simd.hppranges
pairwise / detail / alignment/pairwise/detail/type_traits.hppranges
scoring / detail / simd_match_mismatch_scoring_scheme.hppconcepts
scoring / detail / simd_matrix_scoring_scheme.hppconcepts
pairwise / align_pairwise.hppconcepts
pairwise / align_pairwise.hppranges
pairwise / align_result_selector.hppranges
pairwise / alignment_algorithm.hppranges
pairwise / edit_distance_fwd.hppconcepts
pairwise / edit_distance_fwd.hppranges
pairwise / edit_distance_unbanded.hppranges